Post by Month

2024

November 2024

• • November 22, 2024

2023

</ul>

December 2023

• CRISPR Diagnostics for Rapid On-Site Detection of Aquaculture Species and Pathogens • December 27, 2023

2022

</ul>

December 2022

• Tues. Dec. 27, 2022 Changing my last name • December 27, 2022

2020

</ul>

December 2020

• Mon. Dec. 7, 2020 Hemolymph Calcium Assay • December 7, 2020

November 2020

• Wed. Nov. 25, 2020 Hemolymph Calcium Assay • November 25, 2020
• Oct 30-Nov 3, Geoduck Broodstock qPCR • November 3, 2020

October 2020

• Thurs. Oct. 29, Geoduck qPCR • October 29, 2020
• Tues. Oct. 27, Salmon RNAseq • October 27, 2020
• 360th Post • October 7, 2020

August 2020

• Aug 13-31 2020 Salmon + lice TxS Genomic Feature Analysis • August 31, 2020

July 2020

• Thur. July 16, Geoduck Broodstock Histology • July 14, 2020
• Jul 2-Aug 12 2020 Salmon + lice TxS DMRs • July 3, 2020

June 2020

• Jun 12, 2020 Re-process Salmon Methylome Data • June 12, 2020
• Apr 22-Jun 7, 2020 Re-process Salmon Methylome Data • June 7, 2020
• May 24-Jun 3, 2020 Sea lice methylome • June 2, 2020

May 2020

• Mon. May 11, Geoduck slides shipped to URI • May 11, 2020

April 2020

• Apr 24-30, 2020 Sea lice methylome • April 30, 2020
• Fri. Apr 24, 2020 • April 24, 2020
• Apr 15-16, 2020 DMCpG proximity for DMRs • April 15, 2020
• Fri. Apr 10, 2020 MethCompare • April 10, 2020
• Wed. Apr 8, 2020 Geoduck DMR genome features • April 8, 2020
• Tues. Apr 3-7, 2020 Geoduck DMR genome features • April 3, 2020

March 2020

• Fri. Mar 27, 2020 Geoduck new trim DMR analysis • March 27, 2020
• Fri. Mar 19-27, 2020 Geoduck EPI Trimming Updated! • March 19, 2020
• Mon. Mar. 16, 2020 Trimming Geoduck RRBS data • March 16, 2020
• Thur. Mar. 12-20, 2020 Geoduck DMR stat analysis • March 13, 2020
• Mon. Mar. 9, 2020 Geoduck Sig. DMR heatmaps with group means • March 9, 2020
• Sat. Mar. 7, 2020 Geoduck DMR GO analysis • March 7, 2020
• Thurs. Mar 5, 2020 Geoduck Outreach in Pt. Townsend • March 5, 2020
• Tues. Mar. 3, Point Whitney Silo Clean up • March 3, 2020

February 2020

• Friday. Feb. 14, Point Whitney Strip Spawn • February 14, 2020

January 2020

• Wed. Jan. 22, 2020 KCl in Geoduck Strip Spawn • January 22, 2020
• Tues. Jan. 21, 2020 Pt Whitney broodstock conditioning • January 21, 2020
• Tues. Jan. 7, 2020 Geoduck methylation analysis on 5x cov. destranded CpG data • January 7, 2020

2019

</ul>

December 2019

• 221th Post • December 20, 2019
• Thur. Dec. 19, Geoduck Brood Conditioning • December 19, 2019
• Wed. Dec. 18, Oyster paper stats • December 18, 2019
• Tues. Dec. 17, DMR pipeline • December 17, 2019

November 2019

• 213th Post • November 13, 2019
• Tues. Nov. 12, Geoduck DMR functional analysis • November 12, 2019
• Nov. 7-9, Geoduck DMR feature analysis • November 9, 2019
• Wed. Nov. 6, Geoduck DMR Summary and Feature Analysis • November 6, 2019
• Nov. 3-5, Salmon DMR analysis • November 5, 2019
• Sat. Nov. 2, Geoduck DMR analysis • November 2, 2019

October 2019

• Wed. Oct. 30, Geoduck filtered DMR validation • October 30, 2019
• Wed. Oct. 30, Geoduck DMR functional analysis • October 30, 2019
• Wed. Oct. 30, Notes on differential methylation stats • October 30, 2019
• Wed. Oct. 30, Geoduck DMR filtering • October 30, 2019
• Tues. Oct. 29, Geoduck DMR filtering • October 29, 2019
• Thur. Oct. 24, Geoduck DMR filtering • October 24, 2019
• Wed. Oct. 23, Geoduck DMR filtering • October 23, 2019
• Fri. Oct. 18, Pt. Whitney Juvenile Geoduck var.low pH experiment • October 18, 2019
• Fri. Oct. 11, Var.low pH x ambient Juvenile Geoduck Pt. Whitney • October 11, 2019
• Thur. Oct. 3, Pt. Whitney Juvenile Geoduck var.low pH experiment • October 3, 2019
• Thur. Oct. 3, Taylor • October 3, 2019
• Tues. Oct. 1, 2019, Geoduck Juv. OA DMR analysis • October 1, 2019

September 2019

• Mon. Sept. 30, Juv. Geoduck Var.low v amb Respirometry • September 30, 2019
• Mon. Sept. 30, Geoduck Genome • September 30, 2019
• Fri. Sept. 27, Pt. Whitney Juvenile Geoduck var.low pH experiment • September 27, 2019
• Wed. Sept. 25, Validating Juv. low pH DMRs • September 25, 2019
• Tues. Sept. 24, Geoduck Broodstock Histology • September 24, 2019
• Mon. Sept. 23, Geoduck Broodstock Histology and Juv. low pH DMRs • September 23, 2019
• Fri. Sept. 20, Salmon/Sea lice BS-data and M-bias • September 20, 2019
• Thur. Sept. 19, 2019 Pt. Whitney Juvenile Var.low pH experiment • September 19, 2019
• Fri. Sept. 13, 2019 Pt. Whitney Juvenile Var.low pH experiment • September 13, 2019
• Thur. Sept. 12, 2019 Geoduck Genome paper • September 12, 2019
• Wed. Sept. 11, 2019 Geoduck genome paper DMR analysis • September 11, 2019
• Mon. Sept. 9, 2019 Geoduck Genome paper • September 9, 2019
• Aug 15 - Sept 9, 2019 Salmon-sea lice BS seq analysis • September 9, 2019
• Fri. Sept. 6, 2019 Pt. Whitney Juvenile Var.low pH experiment • September 6, 2019
• Thur. Sept. 5, 2019 Pt. Whitney Juvenile Var.low pH experiment • September 5, 2019

August 2019

• Fri. Aug. 30, 2019 Pt. Whitney Juvenile Exp. Setup • August 30, 2019
• Thur. Aug. 29, 2019 Sequim dig and Pt. Whitney Juvenile Exp. Setup • August 29, 2019
• Tues. Aug. 27, 2019 Pt. Whitney Juv. Geoduck resistance to stress plans • August 27, 2019
• 163th Post • August 26, 2019
• 159th Post • August 22, 2019
• Aug. 21-26, 2019 Geoduck genome paper-DMRs • August 21, 2019
• Tues. Aug. 20, 2019 Pt. Whitney Juv. Geoduck resistance to stress plans • August 20, 2019
• Fri. Aug. 16, 2019 Geoduck genome paper BS analysis • August 16, 2019
• Thur. Aug. 15, 2019 Pt. Whitney Juv. Exp. plans, FFAR call • August 15, 2019
• Aug. 13-14, 2019, Salmon-Sea lice analysis and geoduck project • August 14, 2019
• Tues. Aug. 13, 2019 Pt. Whitney Juv. Geoduck resistance to stress plans • August 13, 2019
• Mon. Aug. 12, 2019 • August 12, 2019
• Fri. Aug. 9, 2019 Salmon and Sea lice new trim + alignments • August 9, 2019
• Thur. Aug. 8, 2019 Pt. Whitney • August 8, 2019
• Wed. Aug. 7, 2019 Geoduck genome paper BS analysis • August 7, 2019
• Tues. Aug. 6, 2019 Salmon + Sea lice BS data analysis • August 6, 2019
• Mon. Aug. 5, 2019 Geoduck genome and juv exp plans • August 5, 2019
• Mon. Aug. 5, 2019 Salmon + Sea lice BS data analysis • August 5, 2019
• Mon. Aug. 5, 2019 General deadlines • August 5, 2019

July 2019

• Thur. Jul. 25, 2019 Salmon sea lice methylome data • July 25, 2019
• Wed. Jul. 24, 2019 Pt. Whitney Juv. Geoduck resistance to stress plans • July 24, 2019
• Tues. Jul. 23, 2019 Salmon + sea lice methylomes and Oyster Proteomics • July 23, 2019
• Mon. Jul. 22, 2019 Salmon sea lice methylomes and Geoduck genome • July 22, 2019
• Fri. Jul. 19, 2019 Salmon sea lice methylomes • July 19, 2019
• Fri. Jul. 12, 2019 Salmon-Sea lice Zymo Pico Methyl prep QC and sequencing • July 12, 2019
• Thur. Jul. 11, 2019 Salmon-Sea lice Zymo Pico Methyl prep • July 11, 2019
• Wed. Jul. 10, 2019 Salmon-Sea lice Zymo Pico Methyl prep + RRBS digest repeat • July 10, 2019
• Tues. Jul. 9, 2019 Salmon RRBS + Zymo Pico Methyl prep • July 9, 2019
• 123th Post • July 8, 2019
• 112th Post • July 1, 2019

June 2019

• 111th Post • June 29, 2019
• Fri. Jun. 28, 2019 Salmon RRBS library prep • June 28, 2019
• Thu. Jun. 27, 2019 Pt. Whitney Juv. Geoduck resistance to stress plans • June 27, 2019
• Wed. Jun. 26, 2019 Pt. Whitney Juv. Geoduck resistance to stress plans • June 26, 2019
• Tues. Jun. 25, 2019 Salmon RRBS prep plans • June 25, 2019
• Thur. Jun. 6, 2019 Pt. Whitney Geoduck seed rearing • June 6, 2019

May 2019

• Fri. May 31, 2019 Methyl CpGoe analysis • May 31, 2019
• Thur. May 30, 2019 WOAC Symposium • May 30, 2019
• Wed. May 29, 2019 Pt. Whitney Geoduck seed rearing • May 29, 2019
• Wed. May 15, 2019 Salmon-sea lice salinity x temp methylomes • May 15, 2019
• Tues. May 14, 2019 Salmon-sea lice salinity x temp methylomes • May 14, 2019
• May 13, 2019 WGBS Geoduck Hemolymph and Oyster seed proteomics • May 13, 2019
• May 10, 2019 WGBS Geoduck Hemolymph and Oyster seed proteomics • May 10, 2019
• May 9, 2019 Geoduck juveniles Pt. Whitney • May 9, 2019
• May 8, 2019 Geoduck broodstock hemolymph DMR calling • May 8, 2019
• Apr 15 - May 3, 2019 Geoduck Broodstock hemolymph WGBS • May 3, 2019
• May 2, 2019 Geoduck larvae at Pt. Whitney • May 2, 2019

April 2019

• May 1, 2019 To Do • April 30, 2019
• Apr 29, 2019 Geoduck juveniles Pt. Whitney • April 29, 2019
• Apr 26, 2019 Geoduck juveniles Pt. Whitney • April 26, 2019
• Apr 8-9, 2019 Oyster seed proteomics • April 9, 2019
• Mon. April 8, 2019 Salmon Sea lice Project • April 8, 2019
• Fri. April 5, 2019 Oyster Seed Proteomics • April 5, 2019
• Apr 3-4, 2019 Oyster Proteomics • April 4, 2019

March 2019

• Tues. Mar 26, 2019, Oyster Seed Proteomics • March 26, 2019
• Temperature-influenced protein network differences in the Pacific oyster during larval development (2019 CSHL Network Bio poster) • March 15, 2019
• Thurs. Mar 14, 2019, Oyster Seed Proteomics • March 14, 2019
• Post • March 13, 2019
• Mon. Mar 4, 2019 oyster proteomics network analysis • March 4, 2019
• Friday. Mar. 1, 2019 oyster proteomics network analysis • March 1, 2019

February 2019

• Thur. Feb 28, 2019 oyster proteomics network analysis • February 28, 2019
• Wed. Feb 27, 2019, Geoduck Broodstock experiment and Oyster Proteomics • February 27, 2019
• Post • February 23, 2019
• Wed. Feb 22, 2019 • February 22, 2019
• Wed. Feb 20, 2019, Geoduck genome versions, histology scoring, pt. whitney supplies • February 20, 2019
• Fri. Feb 15, 2019; Diploid and triploid global DNA methylation and crab RNA • February 15, 2019
• Thur. Feb 14, 2019 Geoduck genome and oyster proteomics • February 14, 2019
• Wed. Feb 5, 2019, Oyster Seed Proteomics Uniprot and Network Mapping • February 5, 2019

January 2019

• Wed. Jan 30, 2019 • January 30, 2019
• Tues. Jan 29, 2019 • January 29, 2019
• Mon. Jan 28, 2019, Geoduck Broodstock DNA extraction from Hemocytes • January 28, 2019
• Wed. Jan 23, 2019, Geoduck Broodstock Dissections • January 23, 2019
• Fri. Jan 18, 2019, Oyster Seed Proteomics to explain mortality • January 18, 2019
• Thurs. Jan 17, 2019 Oyster Seed Proteomics, ASCA on average NSAF values for all proteins • January 17, 2019
• Wed. Jan 16, 2019 Oyster Seed Proteomics, ASCA on average NSAF values of filtered proteins • January 16, 2019
• Tues. Jan 15, 2019, Oyster Seed Proteomics, filter inconsistently detected proteins and cluster replicates • January 15, 2019
• Fri. Jan 11, 2019 Oyster Seed Proteomics, Clustering technical replicates • January 11, 2019
• Fri. Jan 11, 2019, Oyster Seed Proteomics • January 11, 2019

2018

</ul>

December 2018

• Tues. Dec. 18, 2018 • December 18, 2018
• Wed. Dec 12, 2018 • December 12, 2018
• Mon. Dec 10, 2018 • December 10, 2018
• Fri. Dec 7, 2018 • December 7, 2018
• Thur. Dec 6, 2018 • December 6, 2018
• Wed. Dec 5, 2018 • December 5, 2018
• Mon. Dec 3, 2018 • December 3, 2018

November 2018

• Fri. Nov 30, 2018 • November 30, 2018
• Thur. Nov 29, 2018 • November 29, 2018
• Wed. Nov 28, 2018 Pt. Whitney • November 28, 2018
• Tues. Nov 27, 2018 • November 27, 2018
• Mon. Nov 26, 2018 • November 26, 2018
• Wed. Nov 21, 2018 • November 21, 2018
• Tues. Nov 20, 2018 • November 20, 2018
• Mon. Nov 19, 2018 Point Whitney • November 19, 2018
• Thurs. Nov 15, 2018 • November 15, 2018
• Wed. Nov 14, 2018 • November 14, 2018
• Tues. Nov 13, 2018 • November 13, 2018
• Mon. Nov 12, 2018 • November 12, 2018
• Fri. Nov 9, 2018 • November 9, 2018
• Thurs. Nov 8, 2018 • November 8, 2018
• Wed. Nov. 7, 2018 • November 7, 2018
• Tues. Nov. 6, 2018 • November 6, 2018
• Fri. Nov 2, 2018 • November 2, 2018
• Thur. Nov 1, 2018 • November 1, 2018

October 2018

• Wed. Oct 31, 2018 • October 31, 2018
• Tues. Oct 30, 2018 • October 30, 2018
• Mon. Oct 29, 2018 • October 29, 2018
• Sun. Oct 28, 2018 • October 28, 2018
• Tues. Oct 25, 2018 • October 25, 2018
• Wed. Oct 24, 2018 • October 24, 2018
• Tues. Oct 23, 2018 • October 23, 2018
• Mon. Oct 22, 2018 • October 22, 2018
• Thur. Oct 18, 2018 • October 18, 2018
• Tues. Oct 9, 2018 • October 9, 2018
• Mon. Oct 1, 2018 • October 1, 2018

September 2018

• Friday. Sept 28, 2018 • September 28, 2018
• Thurs. Sept 27, 2018 • September 27, 2018
• Wed. Sept 26, 2018 • September 26, 2018
• Tues. Sept 25, 2018 • September 25, 2018
• Mon. Sept 24, 2018 • September 24, 2018
• Fri. Sept 21, 2018 • September 21, 2018
• Thur. Sept 20, 2018 • September 20, 2018
• Wed. Sept 19, 2018 • September 19, 2018
• My First Post • September 18, 2018