Aug 13-31 2020 Salmon + lice TxS Genomic Feature Analysis
Gathering genomic feature data
I intially downloaded the genome gff from NCBI here:
ftp://ftp.ncbi.nlm.nih.gov/genomes/Salmo_salar/GFF/ref_ICSASG_v2_top_level.gff3.gz
[Read More]
Thur. July 16, Geoduck Broodstock Histology
This post is in reference to the histology done on the Fall-Winter 2018-2019 Broodstock conditioned in constant low pH. This is data analysis for the manuscript on pH effect on reproductive development
[Read More]
Jul 2-Aug 12 2020 Salmon + lice TxS DMRs
I re-processed the salmon RRBS data implementing the following changes:
[Read More]
Jun 12, 2020 Re-process Salmon Methylome Data
redo trimming
I’m re-doing the trimming on the Salmon BS data with 10bp clipped off each end of the read based on bismark recommendations
[Read More]