My Lab Notebook

bedtools makewindows -b v074/Pgenerosa_v074.mRNA.bed -n 10 did this: https://github.com/s-andrews/BamQC/blob/master/README.md on ostrich had to install ant (followed these directions) BamQC results file:///Volumes/web/metacarcinus/Pgenerosa/analyses/20190806_v074/multisampleBamQcReport.html [Read More]

I. Concatenate newly trimmed reads These newly trimmed reads are from analysis started on 8/6; see notebook entry here): [Read More]

Juvenile check [Read More]

Amb-low versus super low-low This analysis focuses on 8 samples: [Read More]

Checksums from copying adapter + 5bp from 5’ trimmed data from mox to gannet: [Read More]