My Lab Notebook

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Call variants from Apul and Peve WGBS data

Posted on July 29, 2025

Purpose To call variants from the EM-seq data for Apul and Peve coral species. [Read More]

Tags: methylseq nf-core EMseq coral E5

Run nf-core Methylseq on Apul WGBS

Posted on July 28, 2025

Purpose Reprocess Apul WGBS data to see if it matches the output Sam and Steven got. [Read More]

Tags: methylseq nf-core coral E5

Create 10x CpG matrix for Peve and Ptua WGBS

Posted on July 28, 2025

Purpose [Read More]

Tags: methylseq nf-core coral E5

Confirm nf-core Methylseq parameters match SR lab for E5 data

Posted on July 14, 2025

Purpose: [Read More]

Tags: methylseq nf-core coral E5

Run nf-core Methylseq pipeline on P. evermanni data

Posted on May 29, 2025

Purpose [Read More]

Tags: methylseq nf-core coral E5